公開日期 | 標題 | 作者 | 來源出版物 | scopus | WOS | 全文 |
2014 | Ancient hybridizations among the ancestral genomes of bread wheat | Marcussen, Thomas; Sandve, Simen R.; Heier, Lise; Spannagl, Manuel; Pfeifer, Matthias; Jakobsen, Kjetill S.; Wulff, Brande B.H.; Steuernagel, Burkhard; Mayer, Klaus F.X.; Olsen, Odd Arne; Rogers, Jane; Doležel, Jaroslav; Pozniak, Curtis; Eversole, Kellye; Feuillet, Catherine; Gill, Bikram; Friebe, Bernd; Lukaszewski, Adam J.; Sourdille, Pierre; Endo, Takashi R.; Kubaláková, Marie; Šíhalíková, Jarmila; Dubská, Zdeňka; Vrána, Jan; Šperková, Romana; Šimková, Hana; Febrer, Melanie; Clissold, Leah; McLay, Kirsten; Singh, Kuldeep; Chhuneja, Parveen; Singh, Nagendra K.; Khurana, Jitendra; Akhunov, Eduard; Choulet, Frédéric; Alberti, Adriana; Barbe, Valérie; Wincker, Patrick; Kanamori, Hiroyuki; Kobayashi, Fuminori; TAKESHI ITOH ; Matsumoto, Takashi; Sakai, Hiroaki; Tanaka, Tsuyoshi; Wu, Jianzhong; Ogihara, Yasunari; Handa, Hirokazu; Maclachlan, P. Ron; Sharpe, Andrew; Klassen, Darrin; Edwards, David; Batley, Jacqueline; Lien, Sigbjørn; Caccamo, Mario; Ayling, Sarah; Ramirez-Gonzalez, Ricardo H.; Clavijo, Bernardo J.; Wright, Jonathan; Martis, Mihaela M.; Mascher, Martin; Chapman, Jarrod; Poland, Jesse A.; Scholz, Uwe; Barry, Kerrie; Waugh, Robbie; Rokhsar, Daniel S.; Muehlbauer, Gary J.; Stein, Nils; Gundlach, Heidrun; Zytnicki, Matthias; Jamilloux, Véronique; Quesneville, Hadi; Wicker, Thomas; Faccioli, Primetta; Colaiacovo, Moreno; Stanca, Antonio Michele; Budak, Hikmet; Cattivelli, Luigi; Glover, Natasha; Pingault, Lise; Paux, Etienne; Sharma, Sapna; Appels, Rudi; Bellgard, Matthew; Chapman, Brett; Nussbaumer, Thomas; Bader, Kai Christian; Rimbert, Hélène; Wang, Shichen; Knox, Ron; Kilian, Andrzej; Alaux, Michael; Alfama, Françoise; Couderc, Loïc; Guilhot, Nicolas; Viseux, Claire; Loaec, Mikaël; Keller, Beat; Praud, Sebastien | Science | 496 | | |
2011 | Asymmetric distribution of gene expression in the centromeric region of rice chromosome 5 | Mizuno, Hiroshi; Kawahara, Yoshihiro; Wu, Jianzhong; Katayose, Yuichi; Kanamori, Hiroyuki; Ikawa, Hiroshi; TAKESHI ITOH ; Sasaki, Takuji; Matsumoto, Takashi | Frontiers in Plant Science | 14 | | |
2013 | Bex-db: Bioinformatics workbench for comprehensive analysis of barley-expressed genes | Tanaka, Tsuyoshi; Sakai, Hiroaki; Fujii, Nobuyuki; Kobayashi, Fuminori; Nakamura, Shingo; TAKESHI ITOH ; Matsumoto, Takashi; Wu, Jianzhong | Breeding Science | 5 | | |
2013 | Characterisation of the wheat (triticum aestivum L.) transcriptome by de novo assembly for the discovery of phosphate starvation-responsive genes: Gene expression in Pi-stressed wheat | Oono, Youko; Kobayashi, Fuminori; Kawahara, Yoshihiro; Yazawa, Takayuki; Handa, Hirokazu; TAKESHI ITOH ; Matsumoto, Takashi | BMC Genomics | 94 | | |
2014 | A chromosome-based draft sequence of the hexaploid bread wheat (Triticum aestivum) genome | Lukaszewski, Adam J.; Alberti, Adriana; Sharpe, Andrew; Kilian, Andrzej; Stanca, Antonio Michele; Keller, Beat; Clavijo, Bernardo J.; Friebe, Bernd; Gill, Bikram; Wulff, Brande; Chapman, Brett; Steuernagel, Burkhard; Feuillet, Catherine; Viseux, Claire; Pozniak, Curtis; Rokhsar, Daniel S.; Klassen, Darrin; Edwards, David; Akhunov, Eduard; Paux, Etienne; Alfama, Françoise; Choulet, Frédéric; Kobayashi, Fuminori; Muehlbauer, Gary J.; Quesneville, Hadi; Šimková, Hana; Rimbert, Hélène; Gundlach, Heidrun; Budak, Hikmet; Sakai, Hiroaki; Handa, Hirokazu; Kanamori, Hiroyuki; Batley, Jacqueline; Vrána, Jan; Rogers, Jane; Číhalíková, Jarmila; Doležel, Jaroslav; Chapman, Jarrod; Poland, Jesse A.; Wu, Jianzhong; Khurana, Jitendra; Wright, Jonathan; Bader, Kai Christian; Eversole, Kellye; Barry, Kerrie; McLay, Kirsten; Mayer, Klaus F.X.; Singh, Kuldeep; Clissold, Leah; Pingault, Lise; Couderc, Loïc; Cattivelli, Luigi; Spannagl, Manuel; Kubaláková, Marie; Caccamo, Mario; Mascher, Martin; Bellgard, Matthew; Pfeifer, Matthias; Zytnicki, Matthias; Febrer, Melanie; Alaux, Michael; Martis, Mihaela M.; Loaec, Mikaël; Colaiacovo, Moreno; Singh, Nagendra K.; Glover, Natasha; Guilhot, Nicolas; Stein, Nils; Olsen, Odd Arne; Maclachlan, P. Ron; Chhuneja, Parveen; Wincker, Patrick; Sourdille, Pierre; Faccioli, Primetta; Ramirez-Gonzalez, Ricardo H.; Waugh, Robbie; Šperková, Romana; Knox, Ron; Appels, Rudi; Sharma, Sapna; Ayling, Sarah; Praud, Sebastien; Wang, Shichen; Lien, Sigbjørn; Sandve, Simen Rød; Matsumoto, Takashi; Endo, Takashi R.; TAKESHI ITOH ; Nussbaumer, Thomas; Wicker, Thomas; Tanaka, Tsuyoshi; Scholz, Uwe; Barbe, Valérie; Jamilloux, Véronique; Ogihara, Yasunari; Dubská, Zdeňka | Science | 1275 | | |
2014 | Construction of pseudomolecule sequences of the aus rice cultivar Kasalath for comparative genomics of Asian cultivated rice | Hiroaki, Sakai; Hiroyuki, Kanamori; Yuko, Arai Kichise; Mari, Shibata Hatta; Kaworu, Ebana; Youko, Oono; Kanako, Kurita; Hiroko, Fujisawa; Satoshi, Katagiri; Yoshiyuki, Mukai; Masao, Hamada; TAKESHI ITOH ; Takashi, Matsumoto; Yuichi, Katayose; Kyo, Wakasa; Masahiro, Yano; Jianzhong, Wu | DNA Research | 52 | | |
2018 | Databases for rice omics studies | TAKESHI ITOH ; Kawahara, Yoshihiro; Tanaka, Tsuyoshi | Rice Genomics, Genetics and Breeding | | | |
2021 | Development of an SSR marker-based genetic linkage map and identification of a QTL associated with flowering time in eustoma | Kawakatsu, Kyoko; Yagi, Masafumi; Harada, Taro; Yamaguchi, Hiroyasu; TAKESHI ITOH ; Kumagai, Masahiko; Itoh, Ryutaro; Numa, Hisataka; Katayose, Yuichi; Kanamori, Hiroyuki; Kurita, Kanako; Fukuta, Naoko | Breeding Science | 1 | | |
2015 | Development of transcriptome shotgun assembly-derived markers in bunching onion (Allium fistulosum) | Tsukazaki, Hikaru; Yaguchi, Shigenori; Sato, Shusei; Hirakawa, Hideki; Katayose, Yuichi; Kanamori, Hiroyuki; Kurita, Kanako; TAKESHI ITOH ; Kumagai, Masahiko; Mizuno, Satoshi; Hamada, Masao; Fukuoka, Hiroyuki; Yamashita, Ken ichiro; McCallum, John A.; Shigyo, Masayoshi; Wako, Tadayuki | Molecular Breeding | | | |
2011 | Distinct evolutionary patterns of Oryza glaberrima deciphered by genome sequencing and comparative analysis | Sakai, Hiroaki; Ikawa, Hiroshi; Tanaka, Tsuyoshi; Numa, Hisataka; Minami, Hiroshi; Fujisawa, Masaki; Shibata, Michie; Kurita, Kanako; Kikuta, Ari; Hamada, Masao; Kanamori, Hiroyuki; Namiki, Nobukazu; Wu, Jianzhong; TAKESHI ITOH ; Matsumoto, Takashi; Sasaki, Takuji | Plant Journal | 25 | | |
2013 | Diversity in the complexity of phosphate starvation transcriptomes among rice cultivars based on RNA-Seq profiles | Oono, Youko; Kawahara, Yoshihiro; Yazawa, Takayuki; Kanamori, Hiroyuki; Kuramata, Masato; Yamagata, Harumi; Hosokawa, Satomi; Minami, Hiroshi; Ishikawa, Satoru; Wu, Jianzhong; Antonio, Baltazar; Handa, Hirokazu; TAKESHI ITOH ; Matsumoto, Takashi | Plant Molecular Biology | 43 | | |
2020 | Erratum: TASUKE+: A web-based platform for exploring GWAS results and large-scale resequencing data (DNA Research (2019) 26:6 (445–452) DOI: 10.1093/dnares/dsz022) | Kumagai, Masahiko; Nishikawa, Daiki; Kawahara, Yoshihiro; Wakimoto, Hironobu; Itoh, Ryutaro; Tabei, Norio; Tanaka, Tsuyoshi; TAKESHI ITOH | DNA Research | | | |
2014 | The First Monocot Genome Sequence: Oryza sativa (Rice) | Sakai, Hiroaki; Tanaka, Tsuyoshi; Antonio, Baltazar A.; TAKESHI ITOH ; Sasaki, Takuji | Advances in Botanical Research | | | |
2020 | Foreign DNA detection by high-throughput sequencing to regulate genome-edited agricultural products | TAKESHI ITOH ; Onuki, Ritsuko; Tsuda, Mai; Oshima, Masao; Endo, Masaki; Sakai, Hiroaki; Tanaka, Tsuyoshi; Ohsawa, Ryo; Tabei, Yutaka | Scientific Reports | 12 | | |
2019 | Genome editing in plants by engineered CRISPR–Cas9 recognizing NG PAM | Endo, Masaki; Mikami, Masafumi; Endo, Akira; Kaya, Hidetaka; TAKESHI ITOH ; Nishimasu, Hiroshi; Nureki, Osamu; Toki, Seiichi | Nature Plants | 130 | | |
2014 | Genome interplay in the grain transcriptome of hexaploid bread wheat | Pfeifer, Matthias; Kugler, Karl G.; Sandve, Simen R.; Zhan, Bujie; Rudi, Heidi; Hvidsten, Torgeir R.; Mayer, Klaus F.X.; Olsen, Odd Arne; Rogers, Jane; Doležel, Jaroslav; Pozniak, Curtis; Eversole, Kellye; Feuillet, Catherine; Gill, Bikram; Friebe, Bernd; Lukaszewski, Adam J.; Sourdille, Pierre; Endo, Takashi R.; Kubaláková, Marie; Číhalíková, Jarmila; Dubská, Zdeňka; Vrána, Jan; Šperková, Romana; Šimková, Hana; Febrer, Melanie; Clissold, Leah; McLay, Kirsten; Singh, Kuldeep; Chhuneja, Parveen; Singh, Nagendra K.; Khurana, Jitendra; Akhunov, Eduard; Choulet, Frédéric; Alberti, Adriana; Barbe, Valérie; Wincker, Patrick; Kanamori, Hiroyuki; Kobayashi, Fuminori; TAKESHI ITOH ; Matsumoto, Takashi; Sakai, Hiroaki; Tanaka, Tsuyoshi; Wu, Jianzhong; Ogihara, Yasunari; Handa, Hirokazu; Maclachlan, P. Ron; Sharpe, Andrew; Klassen, Darrin; Edwards, David; Batley, Jacqueline; Lien, Sigbjørn; Steuernagel, Burkhard; Wulff, Brande; Caccamo, Mario; Ayling, Sarah; Ramirez-Gonzalez, Ricardo H.; Clavijo, Bernardo J.; Wright, Jonathan; Spannagl, Manuel; Martis, Mihaela M.; Mascher, Martin; Chapman, Jarrod; Poland, Jesse A.; Scholz, Uwe; Barry, Kerrie; Waugh, Robbie; Rokhsar, Daniel S.; Muehlbauer, Gary J.; Stein, Nils; Gundlach, Heidrun; Zytnicki, Matthias; Jamilloux, Véronique; Quesneville, Hadi; Wicker, Thomas; Faccioli, Primetta; Colaiacovo, Moreno; Stanca, Antonio Michele; Budak, Hikmet; Cattivelli, Luigi; Glover, Natasha; Pingault, Lise; Paux, Etienne; Sharma, Sapna; Appels, Rudi; Bellgard, Matthew; Chapman, Brett; Nussbaumer, Thomas; Bader, Kai Christian; Rimbert, Hélène; Wang, Shichen; Knox, Ron; Kilian, Andrzej; Alaux, Michael; Alfama, Françoise; Couderc, Loïc; Guilhot, Nicolas; Viseux, Claire; Loaec, Mikaël; Keller, Beat | Science | 253 | | |
2018 | Genome sequences of Oryza species | Kumagai, Masahiko; Tanaka, Tsuyoshi; Ohyanagi, Hajime; Hsing, Yue Ie C.; TAKESHI ITOH | Rice Genomics, Genetics and Breeding | | | |
2014 | Genome-wide transcriptome analysis reveals that cadmium stress signaling controls the expression of genes in drought stress signal pathways in rice | Oono, Youko; Yazawa, Takayuki; Kawahara, Yoshihiro; Kanamori, Hiroyuki; Kobayashi, Fuminori; Sasaki, Harumi; Mori, Satomi; Wu, Jianzhong; Handa, Hirokazu; TAKESHI ITOH ; Matsumoto, Takashi | PLoS ONE | 96 | | |
2016 | Genomic dissection of a ‘Fuji’ apple cultivar: Re-sequencing, SNP marker development, definition of haplotypes, and QTL detection | Kunihisa, Miyuki; Moriya, Shigeki; Abe, Kazuyuki; Okada, Kazuma; Haji, Takashi; Hayashi, Takeshi; Kawahara, Yoshihiro; Itoh, Ryutaro; TAKESHI ITOH ; Katayose, Yuichi; Kanamori, Hiroyuki; Matsumoto, Toshimi; Mori, Satomi; Sasaki, Harumi; Matsumoto, Takashi; Nishitani, Chikako; Terakami, Shingo; Yamamoto, Toshiya | Breeding Science | 23 | | |
2012 | Global transcriptome analysis reveals distinct expression among duplicated genes during sorghum-interaction | Mizuno, Hiroshi; Kawahigashi, Hiroyuki; Kawahara, Yoshihiro; Kanamori, Hiroyuki; Ogata, Jun; Minami, Hiroshi; TAKESHI ITOH ; Matsumoto, Takashi | BMC Plant Biology | 43 | | |